Monthly Archives: October 2014

Ebola; Zombie Apocalypse or Just Another Infection?

Just in case know the rules of Zombieland...

Just in case know the rules of Zombieland…

In the past several weeks the world has seen the horrible images of what the Ebolavirus can do to a human thrust into the public eye. Understandably there has been a lot of discussion, fear and misunderstanding in regards to Ebola. I’m hoping to lay out some information about the disease, assuage some fears, correct some of the misunderstanding and give the non-scientific public (or at least people I know) a glimpse into what is known about the disease.

First off, I have a Masters in Cell Biology/Immunology with a special emphasis in Infectious Disease Research. I currently do mucosal HIV research, looking at the dynamics of how HIV and the gut microbiome interact and how these interactions affect disease progression and pathogenesis. My Masters Thesis focused on the recognition of Mycobacterium tuberculosis by Dendritic Cells (a key piece of our immune system) and how the bacteria are able to corrupt our own host responses in order to avoid recognition and survive. So, in short, I have a fairly strong background in working with various infectious diseases, including Level 3 pathogens, though I am by no means an expert on Ebolavirus specifically. The thoughts below are merely my interpretations of the literature which I have read, the discussions I’ve had with others in the field, and observations on how our hospital (University of Colorado Anschutz) is preparing for this threat.

Images of Ebolavirus (top) with a schematic of its structure below.

Images of Ebolavirus (top) with a schematic of its structure below.

What is Ebola?

The Ebolavirus is part of the Filoviridae family, a group of single-stranded negative sense RNA viruses. What the hell does that mean, basically it’s a virus. They are tiny structures of RNA with an envelope wrapped around the outside, they have a very basic genome, are able to form multi-virion strands (up to 6), but require the full intact structure to replicate (the RNA itself is non-infectious). There are 5 different subtypes of Ebola, each one slightly different in how virulent (infectious and deadly) it is, the current outbreak in Guinea, Sierra Leone and Liberia is caused by a variant of Zaire Ebolavirus. In most people the virus causes what’s know as hemorrhagic fever, a not so fun complex process by which the immune system is hyperactivated to such an extent that the virus literally destroys you from the inside, causing massive blood vessel leakage and organ damage. This is not a new disease, first officially discovered in 1976 in the Democratic Republic of the Congo (Zaire strain), and it has flared up numerous times in the past 40years, though the previous flare ups have all burned themselves out in more rural areas. The current outbreak has spread to the urban areas in West Africa and continues to spread uncontrolled as of this moment (10/21/14). Below I will discuss the general pathology (what happens with disease), the current state of Ebolavirus research, and what all of this means for both the US and the World (in my opinion). (Ansari AA et al 2014, Feldman H et al 2011)

A map showing the location of the 2014 Ebolavirus outbreak. As of Oct 21st there have been over 9000 cases and 4500 confirmed deaths. Making this the largest Ebola outbreak in history.

A map showing the location of the 2014 Ebolavirus outbreak. As of Oct 21st there have been over 9000 cases and 4500 confirmed deaths. Making this the largest Ebola outbreak in history.

Infection and Symptoms

The Ebolavirus, like other filoviruses, survives in and is transmitted through contact with bodily fluids such as; blood, vomit, stool, saliva, semen, urine, puss, etc. The current research and epidemiology show no evidence for generalized aersole transmission (unlike flu or cold viruses), though Ebolavirus has been shown to survive in body fluids outside of the host for several hours on surfaces, making it much easier to contract than a virus like HIV. Infection occurs when infectious materials/fluids come into contact with the mucus membranes or open wounds of a new individual (eyes, mouth, throat, nose, cuts/scrapes, etc). After infection there is what is known as an incubation period (average 4-10days), in which the virus is replicating in the individual but they don’t show any obvious signs of being sick, during this stage the new individual is not known to be infectious. During this latter part of this incubation period the initial symptoms are very general and include; fever, chills, malaise and myalgia. During the later stages of disease (typically 6-16 days) the disease takes on its more severe form in which excessive immune activation leads to coagulation disorders, blood vessel leakage, multiorgan failure and shock, often leading to death. The current Ebolavirus strain (Zaire) has a 60-90% fatality rate, though some do recover from the disease back to (apparently) full health. We still do not know exactly what leads to Ebolavirus immunity, but high levels of specific neutralizing antibodies seem to be one of the leading candidates. (Ansari AA et al 2014, Feldman H et al 2011, Hoenen T et al 2012)

Treatment Options

There are not currently any officially FDA approved vaccines or treatment options available to the general public, though there are many strong candidates in the works. Several different vaccine candidates are in development, but none have gone beyond animal trials as of this writing (Oct 2014). Several have shown very strong abilities to protect Non-Human Primates (monkeys) from infection and thus may also work in humans, TBD. Post exposure treatments are in a similar state, with several treatments having shown to be effective in animal models, but none have been extensively tested in humans. The two most common experimental treatments are the use of serum from previously immune (recovered patients) and a synthetic antibody cocktail known as ZMAPP. Both are based on the premise that specific antibodies against Ebolavirus can help the patient neutralize the infection and thus recover. All of these treatments are experimental and have NOT been extensively tested for safety and efficacy in humans, but due to the high mortality rate of Ebolavirus infection they are being used in a life saving experimental fashion. NOTE: The makers of ZMAPP are now working with Amgen to see if it would be possible to scale up its production in order to have larger quantities of this therapeutic on hand in case its needed. (Ansari AA et al 2014, Feldman H et al 2011, Hoenen T et al 2012)

Why All the Confusion?

Ebolavirus research lags behind many other disease for several reasons. One, there is not as much funding for Ebolavirus as there is for HIV, TB, and many other more prominent diseases. Two, since Ebolavirus is a Biosafety Level 4 pathogen there are only a dozen or so research laboratories that have the facilities to properly and safely study this virus. Even though the Ebolavirus research is in its infancy, it is much further along than HIV research was when the initial HIV outbreak happened in the 80s and 90s, thus there is much more promise for containing its spread.

A lot of the current fear instilled in populations of the developed world revolves around several health care workers becoming infected, and thus the concern that the virus may easily spread throughout the world. Note that just as in Africa, those becoming infected are people who have direct contact with highly infectious patients, and not simple casual bystanders. What these secondary infections in health care workers do highlight is the need for a more coordinated plan on how to deal with isolated patients in order to properly protect the care givers from the infectious virus. Many hospitals (Emory and Nebraska are two exceptions) don’t have the proper containment wards setup and Personal Protective Equipment (PPE) protocols in place to deal with an Ebolavirus infected patient if they were to walk into their facilities today. This is very disconcerting for healthcare workers who would be at high risk for transmission as they treat the patient. After the transmissions in Dallas many hospitals have implemented procedures and specific protocols on how to identify and deal with a potentially infected patient (UC Denver Anschtuz is working on this now). This is where I feel the CDC has dropped the ball the most, in not implementing an extremely detailed Nation wide protocol for hospitals on how to identify and deal with a potential Ebola case, their hospital guidelines were initially very general and in my opinion not adequate for something that is so deadly.

Evolution of the CDC recommended Personal Protective Equipment (PPE) for those treating Ebola patients. http://www.nytimes.com/interactive/2014/10/15/us/changes-to-ebola-protection-worn-by-us-hospital-workers.html

Evolution of the CDC recommended Personal Protective Equipment (PPE) for those treating Ebola patients. http://www.nytimes.com/interactive/2014/10/15/us/changes-to-ebola-protection-worn-by-us-hospital-workers.html

What Does This Mean For Me?

For most of us (me included) this outbreak in West Africa, while tragic, does not pose a direct threat to us individually. It is definitely something worth watching to see how well the CDC and WHO are able to help control the spread of the disease in the impoverished countries, but spread in the developed world has been halted by simple containment protocols and proper handling. I wouldn’t go traveling to West Africa any time soon though. If you are a healthcare worker, specifically one who works in a hospital, ER or ICU I would be more concerned until I knew my facility had the proper protocols, PPE and containment facilities in place to handle a patient potentially infected with Ebolavirus. These are the people who are at high risk because they are asked to care for the highly infectious and to put themselves directly in harms way. For now, unless you are a healthcare worker there are many more things to worry about, Ebola being quite a ways down the list. Information on the current status of the West African Outbreak, where the disease has been treated outside West Africa, and the state of the current coordinated effort on the CDCs website.

If all else fails, just remember the rules of Zombieland

References

CDC website, http://www.cdc.gov/vhf/ebola/outbreaks/2014-west-africa/index.html

Ansari AA, Clinical features and pathobiology of Ebolavirus infection, Journal of Autoimmunity (2014), http://dx.doi.org/10.1016/j.jaut.2014.09.001

Feldman H et al, Ebola haemorrhagic fever, Lancet. 2011 March 5; 377(9768): 849–862.

Hoenen T, Current Ebola vaccines, Expert Opin Biol Ther. 2012 July; 12(7): 859–872.

Gatherer D, The 2014 Ebola virus disease outbreak in West Africa, Journal of General Virology (2014), 95, 1619–1624.

Resting; it’s not just for the injured and broken

Hello my name is Eric and I’m an addict; not to alcohol or drugs, but to outdoor activity, especially running/hiking/climbing. Like many other endurance athletes I’ve traded in the many other vices of the world for physical activity, and while I’ve heard many people say that it’s a healthy hobby, it is possible to have too much of a good thing. Over the past ten years I’ve been competing in endurance events, predominantly ultramarathons (races longer than a marathon), I have seen many a competitor come and go from the sport. Some succumb to injuries, some to the dreaded adrenal fatigue (overtraining) and others simply mentally burn out and move on. While there are many tips/tricks/strategies to keeping oneself fresh and healthy in such a demanding sport (cross training, strength/balance training, moderation), one thing that I find is key to preventing physical and mental burnout is a nice long rest period at the end of every season. I’m not talking about the week off you took after your 100mile race, the fact you changed over to cycling 200miles/week instead of running, and no a 50-60mile week is not real rest. I’m talking about limited cardiovascular activity, 20-30miles of easy running/hiking a week, no tempo runs, no long runs, no epic adventures, no double days, but 3-4weeks of rest and recovery for a body much in need.

Forcing myself to slow down, climbing and scrambling amongst the Boulder Flatirons.

Forcing myself to slow down, climbing and scrambling amongst the Boulder Flatirons.

As endurance athletes we pride ourselves on suffering, and how much pain we can endure, but eventually it becomes more than a mental game and takes a physical toll on your body. Over the past ten years I’ve watched many a friends and competitors push themselves at such a high intensity for so long, that their body eventually gives way with catastrophic consequences, leading to a long term forced hiatus from the sport. I think its time that we endurance athletes start thinking about doing what’s right for our body in the long haul. That’s why every Oct/Nov I take 3-4weeks of very limited cardiovascular activity and let the entire system reenergize and recover. We don’t build up all this stress overnight, so why do we think the body can fix it overnight?

I clean up alright (I think), blues dancing the night away.

I clean up alright (I think), blues dancing the night away.

I think the most difficult part of this extended rest is mentally committing to not running/hiking much, while still getting outside to enjoy the time you have. During these down times I personally love to play volleyball, do some dancing, maybe a little technical climbing, and catch up on house chores. Coming from a mountaineering background into the running world, what I’ve noticed is many people who are life time runners, don’t know anything else, thus don’t feel like themselves unless they are running. These are the people whom I would push the most to find some alternative hobbies to meld in, ones that don’t tax the cardiovascular system and the legs as much as running/hiking/cycling. There are so many great activities out there, why limit yourself to just one? I don’t have any scientific proof for my hypothesis, just a bunch of anecdotal observations. Whether its superstition or actually physiological effects doesn’t really matter, because after 10 years it’s kept me physically and mentally fresh. So give your body a break, even if you’re not sore, injured or fatigued, think long term, and get out and enjoy something a little different. Of course, this just one man’s opinion, so do whatever makes you happy in the long run.

Pacing the 2014 Bear 100

In the Spring of 2014 during our weekly night run (Boulder Trail Runners, Wed 8:30pm) Jason was quizzing me on what I thought were the best ‘first time’ 100mile races out there. I’ve run and/or paced at 12 different 100mile races, and at the top of my list as being recommended for first timers are Bighorn 100 and the Bear 100. Both are phenomenal courses, though challenging, with a mix of hike-able terrain and smoother single track, great aid stations and support and a generous final cutoff time. The seed had been planted, and Jason was intrigued, but being a working family man with two young girls he wasn’t sure if he could commit the time necessary to train for something as big as 100miles. I promised him ‘If you sign up for the Bear, I’ll come pace you’…….

June came and went, July rolled around and it was Hardrock time, after that I settled into my typical summer pattern of some maintenance runs during the week and big adventure runs in the Colorado Rockies on the weekends. On one of these adventures, the Ten Mile Traverse near Breckenridge, Jason let me know that he was feeling good about training and thus was going to sign up for the Bear 100. He was calling me out on my promise to pace him, and I couldn’t say no to being a part of such a wonderful and challenging journey.

Scott and Jason cruising across the mellow part of the Ten Mile Range

Scott and Jason cruising across the mellow part of the Ten Mile Range

September finally rolled around and it was go time, after a quick meeting with Jason and his wife Meggan the plan was set, Meggan and Karen (Jason’s sister) would do much of the crewing and I’d pace the final 49miles of the course. All Jason had to do was keep moving, easier said than done when you’re talking about 28-36hours and 100miles with 22000ft of elevation gain.

Erin Gibbs and I bailed out of Denver on Thursday afternoon and booked it for the Utah border, we wouldn’t see our runners until mm30 as we were planning to sleep in a bit. Friday morning (race day) was beautifully clear and quite hot, which made us hopeful that the 60% chance of precip forecast for Saturday would not materialize, but by the time we left the condo to head on course, the weather report read 80%…..rain was coming.

Jason making his way into Cowley at mm30.

Jason making his way into Cowley at mm30.

Gibbs, Chris and I packed up and headed onto the course to cheer on our runners as we waited our respective turns to start pacing. All three of our runners Misti (Chris), Jason (me) and Mark (Gibbs) looked good coming into the aid stations at miles 30, 37 and 45. Jason had gone out at a very comfortable pace and was moving strong, just what I wanted to see him do the first 50miles. Karen joined him from mm37-mm45 while Meggan joined him from mm45-mm51. This gave me a chance to get my $%&* together for the long night ahead, a 49mile jaunt from sunset through sunrise all the way to the finish.

Meggan, Jason and Karen jogging into Temple Fork. Meggan about to start pacing, Karen finishing up pacing.

Meggan, Jason and Karen jogging into Temple Fork. Meggan about to start pacing, Karen finishing up pacing.

The course this year was absolutely stunning, the aspens were a vibrant mixture of green, yellow, orange and red, the maples looked like they’d exploded in flames and so far only a few drops of rain had fallen….little did we know what was coming. Karen and I waited at Tony Grove for Meggan and Jason as darkness began to envelope the mountains. We watch Misti and Chris come through, then friends Kristel and Rob…finally we heard Jason’s voice, it was go time. We loaded up and headed off up the hill into the darkness. Our cruise up and over into Franklin Basin was fairly uneventful, just a few sprinkles and some distant flashes of lightning, but that all changed as we headed up and over the hill to the Logan River AS.

First rain storm of the night around midnight, all geared up and having fun.

First rain storm of the night around midnight, all geared up and having fun.

 

Then we realized that rain meant mud, sticky, slippery mud....mm56.

Then we realized that rain meant mud, sticky, slippery mud….mm56.

Around 1am a steady rain began to fall, and we watched from the safety of the aid station, trying to decide if this was here to stay. Jason and I both devoured some of the most delicious grilled cheese sandwiches and soup we’d tasted before setting off on the now wet trail. As we hiked up the hill toward Beaver Mountain the rain subsided, but our formerly dusty trail had been turned into several inches of slick and clumpy mud, it was going to be a long night.

We made good time downhill, but Jason’s shin (tibialis anterior tendonitis) was really starting to bother him when we ran. Finally the lights of the ski lodge came into view and we jogged the final bit to the lodge door, greeted by the musty smell of dirty sweaty runners. The scene in the ski lodge is always somewhat depressing, people passed out in every corner, exhausted runners with their heads between their knees, and way too much negative energy. Meggan set to work on Jason’s shin, Karen refilled his pack/gear and I went into a frenzy finding Jason and myself some food to eat. I didn’t want him to hang around here longer than absolutely necessary. We finally got all our stuff in order and set off back into the early morning hours, it would be ten miles before the crew again, and it would turn out to be a LONG ten miles.

We briskly power hiked up the jeep road, and admittedly I began to get a little sleepy (having been awake for almost 20hours), but was rudely awakened by the light rain that began to fall. The rain picked up and it was at this point that it became very apparent Jason had left his waterproof jacket with the crew and was only sporting a wind breaker. As the rain picked up I realized we needed to get to the Gibson Basin AS in a hurry. We pushed the last 1/2mile into the meager aid station where 6-8 runners were already huddled under the small tarps as the wind and rain pounded the surroundings, many were soaked, several were contemplating dropping, and I knew if I couldn’t keep Jason semi-dry and warm-ish until we reached crew he might be in danger of this as well.

Jason and other runner hunkered down under our small tarp at Gibson Basin as the rain pounds us. No one was dry, but the Aid Station workers were still awesome.

Jason and other runner hunkered down under our small tarp at Gibson Basin as the rain pounds us. No one was dry, but the Aid Station workers were still awesome.

Jason threw on my rain pants, stripped off his soaking wet wind breaker in exchange for his insulated layer (not waterproof) and threw on a garbage bag I’d rustled up from the aid station. I told him to eat some soup and to drink some water, because once we started moving we weren’t going to break until we reached the next aid station. Another runner Jeff hooked on with us and we shuffled off into the rainy night. The dirt road was flooded, everything not under water was covered in slippery mud and the wind blew the rain sideways. We finally hit the small climb that marked the last mile into the Beaver Campground, and the driving rain became a light drizzle. We felt much better about our situation, as we’d survived the cold damp night in ok shape.

Cruising through the changing fall colors between Beaver Campground and Ranger Dip, its a muddy mess.

Cruising through the changing fall colors between Beaver Campground and Ranger Dip, its a muddy mess.

We jogged down the slick as snot mud into the AS, apparently Meggan and Karen didn’t recognize us, so I made a beeline for the car, slamming my face into the passenger’s side door, they both let out a loud shriek of terror, success, they knew we had arrived 🙂 The drama was over, so we changed into some dry clothing, restocked our food and water and quickly headed back out on the trail.

Jason’s original goal was a sub-30h finish, and we were gonna have to push it to make the time (15miles in 4.25h). Jason’s shin had gotten worse and it was causing him pretty severe pain on the flats and downhills. I told him that if he hung with me I’d get us to that finish line as quick as possible, but it was gonna hurt, and the only way to make the hurt stop was to finish. We pushed on to Ranger Dip, made a very quick and efficient pit stop and were soon headed up the final 800ft climb. As we started the big descent into Fish Haven Jason’s shin began to scream in pain with every step. I pushed him onward, not sure how best to distract him from the obvious misery.

Meggan, Jason and I jogging into the finish of the Bear 100. Photo by Karen Oliver.

Meggan, Jason and I jogging into the finish of the Bear 100. Photo by Karen Oliver.

The rain descended back onto us, turning a normally steep dusty downhill into a flowing river of greasy mud, some of the toughest and nastiest conditions I’ve ever encountered on a trail. My semi-fresh legs were struggling to slip and slide down the hill, Jason’s tired and aching legs were obviously not fairing as well. I did my best to urge Jason on through the slippery mud and the painful shin injury. Near the bottom we caught up to Chris and finally hit the dirt road that led into town. A huge wave of relief came over us all, we had 45min to do less than 2miles, and boy did we relish being back on that smooth dirt road. We finally crossed the highway, picked up Meggan and Karen for our final jog across the line. At 29h36min Jason finished his first 100miler; tired, muddy, a little water logged but very excited to have completed our journey, especially considering all the adversity the course had provided. Our condo went 4 for 4 on that day; with Misti, Kendrick, Jason and Mark all finishing. I was also excited to see many other friends tough it out to the finish; congrats to Ted, Jon, Nate, Bryon, Gavin, Jorge, Wendy, Ellen and all the finishers of the 2014 Bear 100, you truly earned this one.

Runners and pacers relishing in a hard earned finish. Just awaiting Mark (who finished). Photo by Karen Oliver.

Runners and pacers relishing in a hard earned finish. Just awaiting Mark (who finished). Photo by Karen Oliver.